dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00322
Location and strand information: 55647 - 57509 (+)
Family: CBM48|GH13_9|GH13
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 6.1565
Protein molecular weight: 71142.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00323
Location and strand information: 57531 - 58739 (+)
Family: null
Protein type: null
Protein description: Glucose-1-phosphate adenylyltransferase

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00324
Location and strand information: 58736 - 59848 (+)
Family: null
Protein type: null
Protein description: Glycogen biosynthesis protein GlgD

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00325
Location and strand information: 59868 - 61295 (+)
Family: GT5
Protein type: CAZyme
Protein description: Glycogen synthase
Protein isoelectric point: 5.1811
Protein molecular weight: 52769.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00326
Location and strand information: 61316 - 63733 (+)
Family: GT35
Protein type: CAZyme
Protein description: Glycogen phosphorylase
Protein isoelectric point: 5.6946
Protein molecular weight: 91790.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00327
Location and strand information: 63808 - 64773 (-)
Family: null
Protein type: null
Protein description: Glycerate dehydrogenase

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00328
Location and strand information: 64887 - 66119 (-)
Family: 2.A.23.1.5
Protein type: TC
Protein description: C4-dicarboxylate transport protein

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00329
Location and strand information: 66173 - 67462 (-)
Family: null
Protein type: null
Protein description: Cysteine desulfurase IscS

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00330
Location and strand information: 67615 - 68559 (-)
Family: HTH_1
Protein type: TF
Protein description: HTH-type transcriptional regulator BenM

Gene clsuter ID: MGYG000004004_3|CGC1
Gene ID: MGYG000004004_00331
Location and strand information: 68920 - 70254 (+)
Family: 2.A.3.8.12
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycogen download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004004_00322	1,4-alpha-glucan branching enzyme GlgB	CAZyme	55647	57509	+	CBM48\| GH13_9\| GH13
MGYG000004004_00323	Glucose-1-phosphate adenylyltransferase	null	57531	58739	+	NTP_transferase
MGYG000004004_00324	Glycogen biosynthesis protein GlgD	null	58736	59848	+	NTP_transferase
MGYG000004004_00325	Glycogen synthase	CAZyme	59868	61295	+	GT5
MGYG000004004_00326	Glycogen phosphorylase	CAZyme	61316	63733	+	GT35
MGYG000004004_00327	Glycerate dehydrogenase	null	63808	64773	-	2-Hacid_dh\| 2-Hacid_dh_C
MGYG000004004_00328	C4-dicarboxylate transport protein	TC	64887	66119	-	2.A.23.1.5
MGYG000004004_00329	Cysteine desulfurase IscS	null	66173	67462	-	Aminotran_5
MGYG000004004_00330	HTH-type transcriptional regulator BenM	TF	67615	68559	-	HTH_1
MGYG000004004_00331	hypothetical protein	TC	68920	70254	+	2.A.3.8.12
Protein ID	Protein Name	Type	Start	End	Strand	Signature